Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Pseudoramibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Eubacteriaceae |
| Genus | Pseudoramibacter |
| Species | Pseudoramibacter alactolyticus |
| Strain | DO-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | root canals |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoramibacter alactolyticus DO-4
Accession NumberCP194340.1
Gene Summary
Adenine Count
570268 bp
Thymine Count
571463 bp
Guanine Count
603097 bp
Cytosine Count
609184 bp
Genome Length
2354012 bp
Protein-coding Genes
2265 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sf1b family dna helicase recd2 | ACRQ5I_06655 | O34481 | + | 1315975 - 1318194 | 82077.7 |
| comf family protein | ACRQ5I_06660 | Q8ZLI8 | + | 1318191 - 1318937 | 27070.8 |
| tyrosine-protein phosphatase | ACRQ5I_06665 | P96717 | + | 1318966 - 1319760 | 29240.3 |
| udp-n-acetylmuramate dehydrogenase | ACRQ5I_06670 | A7FYX2 | + | 1320059 - 1320949 | 31713.1 |
| php domain-containing protein | ACRQ5I_06675 | Q3A1D3 | + | 1320946 - 1321716 | 28997.9 |
| rnase adapter rapz | ACRQ5I_06680 | A4XIN0 | + | 1321713 - 1322585 | 32580.3 |
| gluconeogenesis factor yvck family protein | ACRQ5I_06685 | Q97LP2 | + | 1322645 - 1323724 | 38982.1 |
| dna-binding protein whia | ACRQ5I_06690 | A3DBM8 | + | 1323663 - 1324571 | 33350.7 |
| mbl fold metallo-hydrolase | ACRQ5I_06695 | Not Available | - | 1324643 - 1325359 | 27281.8 |
| hypothetical protein | ACRQ5I_06700 | Not Available | + | 1325349 - 1325591 | 8702.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.