Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Pseudoramibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Eubacteriaceae |
| Genus | Pseudoramibacter |
| Species | Pseudoramibacter alactolyticus |
| Strain | DO-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | root canals |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoramibacter alactolyticus DO-4
Accession NumberCP194340.1
Gene Summary
Adenine Count
570268 bp
Thymine Count
571463 bp
Guanine Count
603097 bp
Cytosine Count
609184 bp
Genome Length
2354012 bp
Protein-coding Genes
2265 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding periplasmic protein | ACRQ5I_04855 | P0AEQ5 | - | 961400 - 962221 | 29696.6 |
| tyrosine-protein phosphatase | ACRQ5I_04860 | P40289 | - | 962315 - 963268 | 35790.9 |
| radical sam family heme chaperone hemw | ACRQ5I_04865 | P54304 | + | 963373 - 964545 | 42669.8 |
| heat-inducible transcriptional repressor hrca | ACRQ5I_04870 | A6TSM2 | + | 964700 - 965743 | 38882.9 |
| nucleotide exchange factor grpe | ACRQ5I_04875 | Q8CXD2 | + | 965786 - 966346 | 20860.1 |
| molecular chaperone dnak | ACRQ5I_04880 | B0KA81 | + | 966421 - 968268 | 64962.4 |
| molecular chaperone dnaj | ACRQ5I_04885 | B8I304 | + | 968437 - 969591 | 41746.3 |
| fad-binding protein | ACRQ5I_04890 | Q8CVK0 | + | 970252 - 971349 | 41024.1 |
| type ii crispr rna-guided endonuclease cas9 | ACRQ5I_04895 | Q8DTE3 | + | 972093 - 975866 | 145759.0 |
| cas9 endonuclease pam-interacting domain-containing protein | ACRQ5I_04900 | Not Available | + | 975839 - 976138 | 11062.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.