Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio gazogenes |
| Strain | PB1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
960178 bp
Thymine Count
963175 bp
Guanine Count
794591 bp
Cytosine Count
798329 bp
Genome Length
3516273 bp
Protein-coding Genes
3004 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cold shock domain-containing protein cspd | MKS89_09455 | Q9KSW4 | + | 2137285 - 2137506 | 7939.33 |
| nadp-dependent isocitrate dehydrogenase | MKS89_09460 | P41561 | - | 2137625 - 2139847 | 80733.9 |
| pseudouridine synthase | MKS89_09465 | Q9F855 | + | 2140275 - 2140958 | 25695.7 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | MKS89_09470 | Q87QK5 | - | 2140993 - 2141625 | 23366.9 |
| imidazole glycerol phosphate synthase subunit hisf | MKS89_09475 | A7MX10 | - | 2141622 - 2142395 | 28532.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | MKS89_09480 | Q87QK7 | - | 2142377 - 2143114 | 26319.4 |
| imidazole glycerol phosphate synthase subunit hish | MKS89_09485 | Q87QK8 | - | 2143137 - 2143748 | 22114.0 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | MKS89_09490 | Q7MLS4 | - | 2143748 - 2144821 | 39755.6 |
| histidinol-phosphate transaminase | MKS89_09495 | Q87QL0 | - | 2144856 - 2145896 | 37990.6 |
| histidinol dehydrogenase | MKS89_09500 | Q87QL1 | - | 2145896 - 2147194 | 46221.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
