Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secf | H9L13_04805 | O33568 | + | 944202 - 945152 | 34222.0 |
| outer membrane protein assembly factor bamd | H9L13_04810 | Q9A6U9 | + | 945295 - 946107 | 30374.0 |
| yihy/virulence factor brkb family protein | H9L13_04815 | P05824 | + | 946135 - 947786 | 59081.6 |
| duf1697 domain-containing protein | H9L13_04820 | Not Available | + | 947783 - 948292 | 17512.2 |
| dienelactone hydrolase family protein | H9L13_04825 | Q09571 | + | 948289 - 949002 | 25589.7 |
| nad-dependent dna ligase liga | H9L13_04830 | Q1GVQ2 | + | 948960 - 951035 | 75157.8 |
| energy transducer tonb | H9L13_04835 | Not Available | - | 951043 - 951624 | 21646.1 |
| yihy/virulence factor brkb family protein | H9L13_04840 | B2S6P1 | - | 951600 - 952542 | 32409.5 |
| subclass b3 metallo-beta-lactamase | H9L13_04845 | P52700 | - | 952539 - 953450 | 31882.2 |
| sdr family oxidoreductase | H9L13_04850 | Q9KQH7 | - | 953440 - 954144 | 24525.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.