Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ku protein | H9L13_04005 | C1F735 | + | 762645 - 763511 | 32132.8 |
| dna ligase d | H9L13_04010 | Q9I1X7 | + | 763515 - 766001 | 91867.2 |
| pas domain s-box protein | H9L13_04015 | A6X554 | - | 766008 - 766931 | 33912.6 |
| penicillin acylase family protein | H9L13_04020 | Q9L5D6 | + | 767094 - 769247 | 80358.9 |
| yihy/virulence factor brkb family protein | H9L13_04025 | Not Available | - | 769322 - 769408 | 3467.09 |
| prolyl aminopeptidase | H9L13_04030 | O32449 | - | 769411 - 770382 | 35896.3 |
| glutamate--cysteine ligase | H9L13_04035 | P46309 | - | 770382 - 771752 | 50700.2 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | H9L13_04040 | Q92J59 | - | 771778 - 772548 | 26923.8 |
| 4-hydroxybenzoate octaprenyltransferase | H9L13_04045 | Q499N4 | + | 772574 - 773488 | 33238.2 |
| tldd/pmba family protein | H9L13_04050 | P0AFK1 | + | 773500 - 774846 | 46005.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.