Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | H9L13_03305 | Q926C3 | - | 636170 - 636628 | 16088.8 |
| pd40 domain-containing protein | H9L13_03310 | A5V876 | - | 636705 - 637913 | 42085.6 |
| ybgc/fadm family acyl-coa thioesterase | H9L13_03315 | P0A8Z5 | - | 637910 - 638359 | 16583.8 |
| duf3089 domain-containing protein | H9L13_03320 | Not Available | - | 638456 - 639580 | 40023.0 |
| holliday junction branch migration dna helicase ruvb | H9L13_03325 | A5V881 | - | 639667 - 640713 | 37409.9 |
| membrane dipeptidase | H9L13_03330 | P27509 | + | 641077 - 642198 | 40312.1 |
| holliday junction branch migration protein ruva | H9L13_03335 | A5V883 | - | 642327 - 642917 | 19596.7 |
| crossover junction endodeoxyribonuclease ruvc | H9L13_03340 | Q5NR76 | - | 643007 - 643498 | 16883.5 |
| yebc/pmpr family dna-binding transcriptional regulator | H9L13_03345 | Q1GWB2 | - | 643603 - 644346 | 26708.0 |
| duf2312 domain-containing protein | H9L13_03350 | Q3STZ0 | - | 644356 - 644598 | 9265.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.