Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit i | H9L13_03005 | P0ABJ0 | + | 576973 - 578973 | 74682.5 |
| cytochrome o ubiquinol oxidase subunit iii | H9L13_03010 | P0ABJ4 | + | 578977 - 579612 | 23133.4 |
| cytochrome o ubiquinol oxidase subunit iv | H9L13_03015 | P0ABJ7 | + | 579609 - 579986 | 13729.2 |
| surf1 family protein | H9L13_03020 | Q15526 | + | 579992 - 580684 | 25505.0 |
| tonb-dependent receptor | H9L13_03025 | A5F661 | + | 581015 - 581485 | 17123.2 |
| prepilin peptidase | H9L13_03030 | Not Available | - | 581494 - 582033 | 18613.5 |
| tetratricopeptide repeat protein | H9L13_03035 | Not Available | - | 582030 - 582818 | 27582.6 |
| lytr c-terminal domain-containing protein | H9L13_03040 | Not Available | - | 582818 - 583852 | 36763.5 |
| type ii secretion system f family protein | H9L13_03045 | Not Available | - | 583856 - 584827 | 35239.9 |
| type ii secretion system f family protein | H9L13_03050 | Not Available | - | 584831 - 585835 | 36662.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.