Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 3 | H9L13_02755 | P26858 | + | 530124 - 530942 | 30556.1 |
| duf983 domain-containing protein | H9L13_02760 | Not Available | + | 530948 - 531304 | 12520.5 |
| surf1 family protein | H9L13_02765 | Not Available | + | 531301 - 531897 | 21432.6 |
| insulinase family protein | H9L13_02770 | P9WHT5 | + | 531894 - 533120 | 43637.0 |
| class i sam-dependent methyltransferase | H9L13_02775 | A0KKF0 | + | 533117 - 533980 | 31827.0 |
| heme exporter protein ccmb | H9L13_02780 | P52219 | - | 533970 - 534587 | 20657.1 |
| heme abc exporter atp-binding protein ccma | H9L13_02785 | Q1GS38 | - | 534584 - 535135 | 18838.9 |
| metallopeptidase family protein | H9L13_02790 | Not Available | - | 535132 - 535530 | 14765.3 |
| Trna-ser | Not Available | Not Available | + | 535617 - 535707 | Not Available |
| yihy/virulence factor brkb family protein | H9L13_02800 | P59960 | - | 535708 - 537431 | 62141.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.