Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | H9L13_02705 | A5VD53 | - | 520274 - 520858 | 20128.6 |
| cytochrome c oxidase subunit ii | H9L13_02710 | Q1RI44 | + | 521008 - 522093 | 38344.0 |
| cytochrome c oxidase subunit i | H9L13_02715 | P31833 | + | 522118 - 523797 | 61215.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | H9L13_02720 | P53605 | - | 523876 - 524346 | 16293.6 |
| tonb family protein | H9L13_02725 | Not Available | + | 524494 - 525060 | 20312.6 |
| hypothetical protein | H9L13_02730 | Not Available | + | 525132 - 525653 | 19659.0 |
| peptidylprolyl isomerase | H9L13_02735 | P0AFL5 | - | 525650 - 526309 | 22996.8 |
| m13 family metallopeptidase | H9L13_02740 | Q8IS64 | - | 526312 - 528387 | 75272.2 |
| protoheme ix farnesyltransferase | H9L13_02745 | A5VD56 | + | 528517 - 529413 | 32119.2 |
| yihy/virulence factor brkb family protein | H9L13_02750 | Q11KD0 | + | 529580 - 530088 | 18543.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.