Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | H9L13_02555 | P52559 | - | 497857 - 498921 | 37720.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | H9L13_02560 | Q8FYW3 | - | 498918 - 499400 | 16260.8 |
| ggdef domain-containing protein | H9L13_02565 | Q9HT84 | + | 499544 - 500125 | 21370.3 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | H9L13_02570 | A5VB15 | - | 500232 - 500918 | 25914.0 |
| carboxypeptidase family protein | H9L13_02575 | P30795 | - | 500918 - 502087 | 43246.9 |
| beta-lactamase family protein | H9L13_02580 | P32959 | - | 502164 - 503435 | 46098.8 |
| udp-glucose 4-epimerase gale | H9L13_02585 | Q59083 | + | 503667 - 504665 | 34920.6 |
| glycerol kinase glpk | H9L13_02590 | Q5FP70 | + | 504622 - 506133 | 53575.8 |
| tigr02281 family clan aa aspartic protease | H9L13_02595 | P29938 | + | 506177 - 506707 | 18121.6 |
| duf2975 domain-containing protein | H9L13_02600 | Not Available | + | 506795 - 507319 | 18934.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.