Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | H9L13_08155 | Q1GRQ3 | - | 1581914 - 1582474 | 20815.0 |
| ump kinase | H9L13_08160 | A5V3G4 | - | 1582471 - 1583199 | 25776.3 |
| toll/interleukin-1 receptor domain-containing protein | H9L13_08165 | Not Available | + | 1583346 - 1585259 | 69667.9 |
| elongation factor ts | H9L13_08170 | Q9X5E8 | - | 1585307 - 1586251 | 32915.4 |
| 30s ribosomal protein s2 | H9L13_08175 | A5V3G2 | - | 1586370 - 1587125 | 27110.3 |
| phosphatidylcholine/phosphatidylserine synthase | H9L13_08180 | P9WPG1 | - | 1587540 - 1588328 | 28217.7 |
| phosphatidylserine decarboxylase | H9L13_08185 | Q1GRP7 | - | 1588325 - 1589062 | 26656.5 |
| nadp-dependent isocitrate dehydrogenase | H9L13_08190 | P50215 | + | 1589166 - 1590395 | 46035.9 |
| fad-dependent oxidoreductase | H9L13_08195 | Q3S8R0 | - | 1590392 - 1591600 | 43854.3 |
| duf2945 domain-containing protein | H9L13_08200 | Not Available | - | 1591646 - 1591855 | 7349.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.