Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | H9L13_08005 | Q7MUY1 | - | 1545368 - 1546120 | 27667.8 |
| tatd family hydrolase | H9L13_08010 | P0AFQ9 | - | 1546117 - 1546893 | 27970.7 |
| yihy/virulence factor brkb family protein | H9L13_08015 | Q92PX0 | - | 1546890 - 1548399 | 54344.3 |
| yihy/virulence factor brkb family protein | H9L13_08020 | P52024 | - | 1548433 - 1549400 | 35537.8 |
| dtmp kinase | H9L13_08025 | A5V3I6 | - | 1549397 - 1550035 | 22460.6 |
| d-alanyl-d-alanine carboxypeptidase | H9L13_08030 | P44466 | - | 1550032 - 1551213 | 41894.4 |
| lytic murein transglycosylase | H9L13_08035 | P41052 | - | 1551256 - 1552383 | 41356.5 |
| Trna-ser | Not Available | Not Available | + | 1552555 - 1552644 | Not Available |
| blai/meci/copy family transcriptional regulator | H9L13_08045 | Not Available | + | 1552762 - 1553142 | 13685.5 |
| m56 family metallopeptidase | H9L13_08050 | P12287 | + | 1553139 - 1555013 | 64722.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.