Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deoxyhypusine synthase | H9L13_07855 | A9KDQ8 | - | 1518614 - 1519696 | 39805.4 |
| type iii plp-dependent enzyme | H9L13_07860 | O50657 | - | 1519819 - 1521048 | 44299.9 |
| threonine/serine dehydratase | H9L13_07865 | A4F2N8 | + | 1521302 - 1522207 | 30912.0 |
| hypothetical protein | H9L13_07870 | Not Available | - | 1522204 - 1522458 | 9263.09 |
| hypothetical protein | H9L13_07875 | Not Available | + | 1522513 - 1522680 | 6009.89 |
| yihy/virulence factor brkb family protein | H9L13_07880 | Q9ZD73 | - | 1522652 - 1523334 | 23692.1 |
| cysteine desulfurase | H9L13_07885 | Q01179 | + | 1523383 - 1524528 | 38855.4 |
| cysteine desulfurase | H9L13_07890 | Q1RHY6 | + | 1524525 - 1525643 | 39201.9 |
| yihy/virulence factor brkb family protein | H9L13_07895 | Q92J08 | + | 1525640 - 1525974 | 12283.8 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 1526011 - 1526105 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.