Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | H9L13_07805 | P39434 | - | 1507493 - 1508764 | 46633.0 |
| hypothetical protein | H9L13_07810 | Not Available | - | 1508806 - 1509213 | 13513.2 |
| uracil-dna glycosylase | H9L13_07815 | Q5SKC5 | - | 1509243 - 1509959 | 25623.9 |
| yihy/virulence factor brkb family protein | H9L13_07820 | Q54XM6 | + | 1510051 - 1511699 | 59485.5 |
| tetratricopeptide repeat protein | H9L13_07825 | Not Available | + | 1511722 - 1513356 | 57946.9 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | H9L13_07830 | Q9X3W5 | + | 1513353 - 1514162 | 28275.5 |
| nad(p)h-hydrate dehydratase | H9L13_07835 | A1S0R2 | + | 1514172 - 1515524 | 46087.7 |
| class i sam-dependent rna methyltransferase | H9L13_07840 | Q9X3W2 | + | 1515545 - 1516693 | 40477.4 |
| mapeg family protein | H9L13_07845 | Not Available | - | 1516690 - 1517145 | 16634.7 |
| amidohydrolase family protein | H9L13_07850 | G3XP38 | - | 1517205 - 1518614 | 50124.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.