Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle-docking protein ftsy | H9L13_07255 | A9CHH2 | - | 1397191 - 1398108 | 32382.1 |
| miab/rimo family radical sam methylthiotransferase | H9L13_07260 | Q9ZDB6 | - | 1398105 - 1399274 | 41854.4 |
| diaminopimelate epimerase | H9L13_07265 | A5VAG4 | - | 1399271 - 1400071 | 28200.5 |
| hypothetical protein | H9L13_07270 | Not Available | + | 1400132 - 1400551 | 14542.6 |
| signal recognition particle protein | H9L13_07275 | P0AGD9 | + | 1400696 - 1402180 | 51806.9 |
| 30s ribosomal protein s16 | H9L13_07280 | A5V9P7 | + | 1402207 - 1402971 | 25684.9 |
| 16s rrna processing protein rimm | H9L13_07285 | Q1GPJ1 | + | 1402977 - 1403474 | 17335.7 |
| nad(p)/fad-dependent oxidoreductase | H9L13_07290 | O83790 | - | 1403471 - 1404436 | 34205.4 |
| hypothetical protein | H9L13_07295 | Not Available | + | 1404533 - 1405045 | 18773.5 |
| trna (guanosine(37)-n1)-methyltransferase trmd | H9L13_07300 | A5V9Q2 | + | 1405056 - 1405787 | 26128.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.