Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii and iii secretion system protein family protein | H9L13_06310 | P55702 | - | 1222790 - 1224292 | 52215.8 |
| flp pilus assembly protein cpab | H9L13_06315 | Not Available | - | 1224360 - 1225406 | 35757.3 |
| prepilin peptidase | H9L13_06320 | Not Available | - | 1225453 - 1225923 | 16602.2 |
| fad-binding oxidoreductase | H9L13_06325 | Q9HXE3 | + | 1225975 - 1227048 | 38028.0 |
| hypothetical protein | H9L13_06330 | Not Available | + | 1227096 - 1227500 | 14256.2 |
| ribonuclease hi | H9L13_06335 | A4Z216 | - | 1227497 - 1227949 | 16827.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | H9L13_06340 | B4R8T7 | - | 1227951 - 1228895 | 34437.3 |
| hypothetical protein | H9L13_06345 | Not Available | + | 1229010 - 1229618 | 21035.1 |
| glycine cleavage system aminomethyltransferase gcvt | H9L13_06350 | Q54DD3 | + | 1229924 - 1231060 | 40746.1 |
| glycine cleavage system protein gcvh | H9L13_06355 | Q92Q10 | + | 1231060 - 1231431 | 13227.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.