Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | H9L13_06260 | Q1GSP2 | - | 1212697 - 1213374 | 23979.2 |
| trab/gumn family protein | H9L13_06265 | Not Available | - | 1213495 - 1214292 | 27986.6 |
| trab/gumn family protein | H9L13_06270 | P77301 | - | 1214531 - 1215433 | 32433.3 |
| glycine--trna ligase subunit alpha | H9L13_06275 | A5VFX8 | + | 1215561 - 1216418 | 32205.1 |
| glycine--trna ligase subunit beta | H9L13_06280 | B4R9A9 | + | 1216418 - 1218421 | 73118.4 |
| hypothetical protein | H9L13_06285 | Not Available | - | 1218418 - 1218738 | 12278.4 |
| type ii secretion system f family protein | H9L13_06290 | Not Available | - | 1218772 - 1219833 | 38744.9 |
| type ii secretion system f family protein | H9L13_06295 | Not Available | - | 1219844 - 1220812 | 35184.2 |
| pilus assembly protein cpae | H9L13_06300 | O78436 | - | 1220869 - 1222137 | 44760.6 |
| cpad family pilus assembly protein | H9L13_06305 | Not Available | - | 1222140 - 1222760 | 21470.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.