Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvra | H9L13_05560 | O31151 | - | 1081543 - 1084620 | 112167.0 |
| s46 family peptidase | H9L13_05565 | V5YM14 | + | 1084788 - 1086833 | 73787.0 |
| hypothetical protein | H9L13_05570 | Not Available | + | 1086895 - 1088784 | 67510.5 |
| rna 2',3'-cyclic phosphodiesterase | H9L13_05575 | Q9YB03 | - | 1088785 - 1089318 | 20025.9 |
| nudix domain-containing protein | H9L13_05580 | A5FWY8 | - | 1089328 - 1089795 | 17799.5 |
| polyphosphate kinase 2 | H9L13_05585 | Q9I154 | + | 1089874 - 1090701 | 32254.5 |
| duf4956 domain-containing protein | H9L13_05590 | Not Available | + | 1090724 - 1091404 | 24293.0 |
| hypothetical protein | H9L13_05595 | Not Available | - | 1091408 - 1092427 | 36354.8 |
| metallophosphoesterase | H9L13_05600 | Q944L7 | - | 1092430 - 1093500 | 38081.6 |
| bax inhibitor-1/ycca family protein | H9L13_05605 | Q9ZE15 | + | 1093667 - 1094416 | 26961.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.