Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas lutea |
| Strain | JS5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas lutea JS5
Accession NumberCP060718.1
Gene Summary
Adenine Count
417283 bp
Thymine Count
421002 bp
Guanine Count
788864 bp
Cytosine Count
790505 bp
Genome Length
2417654 bp
Protein-coding Genes
2457 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | H9L13_05105 | P06621 | - | 998101 - 999309 | 41256.2 |
| rna pyrophosphohydrolase | H9L13_05110 | Q9RH11 | - | 999350 - 999823 | 18487.8 |
| hypothetical protein | H9L13_05115 | Not Available | - | 999842 - 1000612 | 28719.2 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | H9L13_05120 | O53182 | + | 1000714 - 1002597 | 66928.1 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | H9L13_05125 | O53181 | + | 1002741 - 1003760 | 36792.0 |
| metal-dependent hydrolase | H9L13_05130 | Not Available | + | 1003898 - 1004854 | 35527.2 |
| class i sam-dependent methyltransferase | H9L13_05135 | O53732 | + | 1004864 - 1006111 | 46303.1 |
| pyridoxamine 5'-phosphate oxidase family protein | H9L13_05140 | Not Available | + | 1006185 - 1006661 | 17628.7 |
| sdr family nad(p)-dependent oxidoreductase | H9L13_05145 | P31808 | - | 1006658 - 1007380 | 25277.5 |
| gaf domain-containing protein | H9L13_05150 | Not Available | + | 1007540 - 1008061 | 18815.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.