Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1
Accession NumberNC_009511.1
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating oxygenase subunit alpha | SWIT_RS03795 | Not Available | - | 824515 - 825771 | 46897.8 |
| nuclear transport factor 2 family protein | SWIT_RS03800 | Not Available | - | 825768 - 826319 | 20263.9 |
| amidase | SWIT_RS03805 | Not Available | - | 826316 - 827428 | 37542.1 |
| marr family winged helix-turn-helix transcriptional regulator | SWIT_RS03810 | Not Available | + | 827543 - 828019 | 18021.6 |
| phenylacetic acid degradation bifunctional protein paaz | SWIT_RS03815 | Not Available | - | 828154 - 830181 | 71914.3 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase paag | SWIT_RS03820 | Not Available | - | 830214 - 831005 | 27986.7 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | SWIT_RS03825 | Not Available | + | 831110 - 832579 | 50095.9 |
| hydroxyphenylacetyl-coa thioesterase paai | SWIT_RS03830 | Not Available | + | 832576 - 833025 | 15743.6 |
| 3-oxoadipyl-coa thiolase | SWIT_RS03835 | Not Available | + | 833018 - 834217 | 41261.8 |
| 1,2-phenylacetyl-coa epoxidase subunit paaa | SWIT_RS03840 | Not Available | + | 834323 - 835321 | 37101.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.