Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1
Accession NumberNC_009511.1
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | SWIT_RS02950 | Not Available | + | 628969 - 629679 | 24268.3 |
| sam-dependent methyltransferase | SWIT_RS02955 | Not Available | - | 629738 - 631018 | 47709.7 |
| hypothetical protein | SWIT_RS02960 | Not Available | - | 631147 - 631605 | 15804.4 |
| gtp cyclohydrolase i fole | SWIT_RS02965 | Not Available | - | 631644 - 632264 | 22934.6 |
| cytochrome b | SWIT_RS02970 | Not Available | - | 632325 - 632900 | 21792.3 |
| glycosyltransferase family 2 protein | SWIT_RS02975 | Not Available | + | 633024 - 634469 | 52800.5 |
| zinc ribbon domain-containing protein yjdm | SWIT_RS02980 | Not Available | + | 634540 - 634839 | 10722.6 |
| homoserine o-succinyltransferase | SWIT_RS02985 | Not Available | - | 634953 - 635906 | 35454.2 |
| phosphodiesterase | SWIT_RS02990 | Not Available | - | 636099 - 636968 | 31685.2 |
| cytochrome c3 family protein | SWIT_RS02995 | Not Available | - | 637097 - 638920 | 65116.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.