Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1
Accession NumberNC_009511.1
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m13 family metallopeptidase | SWIT_RS02605 | Not Available | - | 556154 - 558199 | 75726.9 |
| duf2062 domain-containing protein | SWIT_RS02610 | Not Available | - | 558258 - 558833 | 21200.2 |
| ssra-binding protein smpb | SWIT_RS02615 | Not Available | - | 558845 - 559327 | 18740.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SWIT_RS02620 | Not Available | - | 559389 - 560264 | 30669.6 |
| lytic transglycosylase domain-containing protein | SWIT_RS02625 | Not Available | + | 560311 - 562359 | 74466.3 |
| circularly permuted type 2 atp-grasp protein | SWIT_RS02630 | Not Available | + | 562655 - 564100 | 52447.6 |
| alpha-e domain-containing protein | SWIT_RS02635 | Not Available | + | 564100 - 565035 | 34543.3 |
| transglutaminase-like domain-containing protein | SWIT_RS02640 | Not Available | + | 565037 - 565864 | 30252.8 |
| signal peptide peptidase sppa | SWIT_RS02645 | Not Available | + | 565939 - 567819 | 65138.4 |
| gnat family n-acetyltransferase | SWIT_RS02650 | Not Available | + | 567804 - 568352 | 19476.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.