Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1
Accession NumberNC_009511.1
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | SWIT_RS24025 | Not Available | - | 5231790 - 5232392 | 22901.8 |
| plp-dependent aminotransferase family protein | SWIT_RS24030 | Not Available | - | 5232389 - 5233762 | 48723.6 |
| hypothetical protein | SWIT_RS28760 | Not Available | + | 5233872 - 5234039 | 6067.57 |
| lyse family translocator | SWIT_RS24035 | Not Available | + | 5234056 - 5234667 | 21268.9 |
| duf2126 domain-containing protein | SWIT_RS24040 | Not Available | + | 5234819 - 5238136 | 121503.0 |
| circularly permuted type 2 atp-grasp protein | SWIT_RS24045 | Not Available | + | 5238144 - 5240681 | 91282.4 |
| transglutaminase domain-containing protein | SWIT_RS24050 | Not Available | + | 5240693 - 5241571 | 31713.0 |
| hypothetical protein | SWIT_RS24055 | Not Available | - | 5241575 - 5241796 | 8710.63 |
| alginate export family protein | SWIT_RS24060 | Not Available | + | 5241909 - 5243252 | 49038.2 |
| duf465 domain-containing protein | SWIT_RS27650 | Not Available | + | 5243446 - 5243616 | 6656.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.