Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1
Accession NumberNC_009511.1
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | SWIT_RS21985 | Not Available | + | 4796851 - 4799118 | 82939.4 |
| class ii histone deacetylase | SWIT_RS21990 | Not Available | + | 4799174 - 4800295 | 39677.2 |
| tonb-dependent receptor | SWIT_RS21995 | Not Available | + | 4800488 - 4802719 | 80447.3 |
| sdr family nad(p)-dependent oxidoreductase | SWIT_RS22000 | Not Available | - | 4802819 - 4803625 | 27696.1 |
| mfs transporter | SWIT_RS22005 | Not Available | + | 4803782 - 4804921 | 38827.9 |
| amino acid permease | SWIT_RS22010 | Not Available | + | 4804918 - 4806249 | 45923.4 |
| aspartate aminotransferase family protein | SWIT_RS22015 | Not Available | + | 4806239 - 4807522 | 46381.7 |
| phosphotransferase enzyme family protein | SWIT_RS22020 | Not Available | + | 4807534 - 4808577 | 38695.6 |
| tetr family transcriptional regulator | SWIT_RS22025 | Not Available | + | 4808574 - 4809206 | 23566.3 |
| l-serine ammonia-lyase | SWIT_RS22030 | Not Available | + | 4809334 - 4810722 | 47625.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.