Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1
Accession NumberNC_009511.1
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | SWIT_RS21835 | Not Available | + | 4759675 - 4762605 | 102582.0 |
| s10 family peptidase | SWIT_RS21840 | Not Available | + | 4762739 - 4764259 | 54463.8 |
| lysr substrate-binding domain-containing protein | SWIT_RS21845 | Not Available | - | 4764256 - 4765179 | 33926.3 |
| pirin family protein | SWIT_RS21850 | Not Available | + | 4765291 - 4766157 | 30250.9 |
| gntr family transcriptional regulator | SWIT_RS21855 | Not Available | - | 4766167 - 4766925 | 28301.7 |
| 2-hydroxyacid dehydrogenase | SWIT_RS21860 | Not Available | - | 4767041 - 4767970 | 32546.6 |
| sdr family oxidoreductase | SWIT_RS21865 | Not Available | - | 4767967 - 4768719 | 25852.9 |
| oxaloacetate decarboxylase | SWIT_RS21870 | Not Available | - | 4768712 - 4769569 | 30151.6 |
| 3-isopropylmalate dehydratase small subunit | SWIT_RS21875 | Not Available | - | 4769566 - 4770198 | 22950.4 |
| 3-isopropylmalate dehydratase large subunit | SWIT_RS21880 | Not Available | - | 4770195 - 4771622 | 51069.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.