Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1
Accession NumberNC_009511.1
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | SWIT_RS21785 | Not Available | + | 4752433 - 4753065 | 22103.6 |
| fumarylacetoacetate hydrolase family protein | SWIT_RS21790 | Not Available | + | 4753062 - 4753820 | 26744.0 |
| aromatic ring-opening dioxygenase subunit liga | SWIT_RS21795 | Not Available | + | 4753817 - 4754143 | 11970.4 |
| extradiol ring-cleavage dioxygenase | SWIT_RS21800 | Not Available | + | 4754145 - 4754963 | 29759.3 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | SWIT_RS21805 | Not Available | + | 4754963 - 4755355 | 14636.4 |
| 2-oxo-hept-4-ene-1,7-dioate hydratase | SWIT_RS21810 | Not Available | + | 4755355 - 4756161 | 28671.3 |
| hpch/hpai aldolase family protein | SWIT_RS21815 | Not Available | + | 4756158 - 4756913 | 26023.4 |
| marr family winged helix-turn-helix transcriptional regulator | SWIT_RS21820 | Not Available | + | 4757141 - 4757722 | 20444.6 |
| marr family transcriptional regulator | SWIT_RS21825 | Not Available | + | 4757756 - 4758214 | 16547.1 |
| acetylornithine deacetylase | SWIT_RS21830 | Not Available | + | 4758318 - 4759484 | 41482.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.