Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1
Accession NumberNC_009511.1
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | SWIT_RS20355 | Not Available | - | 4426789 - 4429269 | 88263.2 |
| hypothetical protein | SWIT_RS20360 | Not Available | - | 4429396 - 4429605 | 7319.95 |
| thioredoxin-disulfide reductase | SWIT_RS20365 | Not Available | + | 4429755 - 4430726 | 34130.6 |
| acyl carrier protein | SWIT_RS20370 | Not Available | - | 4430883 - 4431158 | 9617.37 |
| acyl-coa ligase (amp-forming), exosortase a system-associated | SWIT_RS20375 | Not Available | + | 4431285 - 4432814 | 53805.4 |
| pyridoxal-dependent decarboxylase, exosortase a system-associated | SWIT_RS20380 | Not Available | + | 4432811 - 4434052 | 43334.0 |
| xrta/pep-cterm system exopolysaccharide export protein | SWIT_RS20385 | Not Available | + | 4434154 - 4434804 | 23189.3 |
| xrta system polysaccharide chain length determinant | SWIT_RS20390 | Not Available | + | 4434835 - 4436358 | 55461.3 |
| aaa family atpase | SWIT_RS20395 | Not Available | + | 4436363 - 4437484 | 39153.2 |
| hypothetical protein | SWIT_RS20400 | Not Available | + | 4437481 - 4439091 | 57943.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.