Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1
Accession NumberNC_009511.1
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response exonuclease | SWIT_RS20100 | Not Available | + | 4366513 - 4367508 | 36103.2 |
| cisplatin damage response atp-dependent dna ligase | SWIT_RS20105 | Not Available | + | 4367562 - 4369160 | 58794.3 |
| methyl-accepting chemotaxis protein | SWIT_RS28950 | Not Available | - | 4369319 - 4370719 | 50374.6 |
| ku protein | SWIT_RS20115 | Not Available | + | 4370839 - 4371696 | 31805.3 |
| dna ligase d | SWIT_RS20120 | Not Available | + | 4371700 - 4374213 | 91821.6 |
| antibiotic biosynthesis monooxygenase family protein | SWIT_RS20125 | Not Available | + | 4374264 - 4374593 | 12845.0 |
| hypothetical protein | SWIT_RS20130 | Not Available | - | 4374747 - 4374980 | 7620.67 |
| rrf2 family transcriptional regulator | SWIT_RS20135 | Not Available | - | 4375198 - 4375611 | 15250.6 |
| Trna-his | Not Available | Not Available | + | 4375752 - 4375828 | Not Available |
| glu/leu/phe/val family dehydrogenase | SWIT_RS20145 | Not Available | + | 4375947 - 4376996 | 35838.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.