Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1
Accession NumberNC_009511.1
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pycsar system effector family protein | SWIT_RS19700 | Not Available | - | 4283121 - 4283663 | 19630.2 |
| acyl carrier protein | SWIT_RS19705 | Not Available | + | 4283799 - 4284041 | 8914.54 |
| serine palmitoyltransferase | SWIT_RS19710 | Not Available | + | 4284016 - 4285248 | 44012.0 |
| atp-binding protein | SWIT_RS19715 | Not Available | + | 4285313 - 4287298 | 70171.0 |
| hypothetical protein | SWIT_RS19720 | Not Available | - | 4287429 - 4288352 | 33061.0 |
| diacylglycerol/lipid kinase family protein | SWIT_RS19725 | Not Available | - | 4288366 - 4289337 | 34373.3 |
| duf2141 domain-containing protein | SWIT_RS19730 | Not Available | - | 4289340 - 4289786 | 15582.8 |
| lps export abc transporter permease lptf | SWIT_RS19735 | Not Available | + | 4289977 - 4291179 | 44375.2 |
| lps export abc transporter permease lptg | SWIT_RS19740 | Not Available | + | 4291176 - 4292270 | 38930.9 |
| sterol desaturase family protein | SWIT_RS19745 | Not Available | + | 4292306 - 4293136 | 31821.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.