Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1
Accession NumberNC_009511.1
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor family protein | SWIT_RS09060 | Not Available | + | 2006562 - 2008556 | 72488.9 |
| cbb3-type cytochrome oxidase assembly protein ccos | SWIT_RS09065 | Not Available | - | 2008566 - 2008715 | 5450.61 |
| cation-translocating p-type atpase | SWIT_RS09070 | Not Available | - | 2008712 - 2010886 | 76147.3 |
| duf2189 domain-containing protein | SWIT_RS09075 | Not Available | - | 2010891 - 2011673 | 28151.5 |
| hypothetical protein | SWIT_RS28855 | Not Available | - | 2011692 - 2011856 | 5585.82 |
| cytochrome-c oxidase, cbb3-type subunit iii | SWIT_RS09080 | Not Available | - | 2011853 - 2012731 | 31708.6 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | SWIT_RS09085 | Not Available | - | 2012722 - 2012892 | 6403.75 |
| cytochrome-c oxidase, cbb3-type subunit ii | SWIT_RS09090 | Not Available | - | 2012899 - 2013624 | 26658.7 |
| cytochrome-c oxidase, cbb3-type subunit i | SWIT_RS09095 | Not Available | - | 2013631 - 2015271 | 61221.9 |
| mucr family transcriptional regulator | SWIT_RS09100 | Not Available | + | 2015608 - 2016054 | 16265.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.