Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1
Accession NumberNC_009511.1
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | SWIT_RS06865 | Not Available | - | 1503035 - 1505107 | 76193.0 |
| 30s ribosomal protein s7 | SWIT_RS06870 | Not Available | - | 1505224 - 1505694 | 17620.2 |
| 30s ribosomal protein s12 | SWIT_RS06875 | Not Available | - | 1505708 - 1506079 | 13921.1 |
| divalent-cation tolerance protein cuta | SWIT_RS06880 | Not Available | - | 1506329 - 1506640 | 11305.7 |
| cation diffusion facilitator family transporter | SWIT_RS06885 | Not Available | - | 1506637 - 1507563 | 33007.0 |
| l,d-transpeptidase family protein | SWIT_RS06890 | Not Available | + | 1507720 - 1508976 | 45144.7 |
| murein l,d-transpeptidase catalytic domain family protein | SWIT_RS06895 | Not Available | + | 1509129 - 1509767 | 22624.0 |
| d-alanyl-d-alanine carboxypeptidase family protein | SWIT_RS06900 | Not Available | + | 1509870 - 1510850 | 34406.5 |
| hypothetical protein | SWIT_RS06905 | Not Available | - | 1510956 - 1511177 | 7904.85 |
| dihydrolipoyl dehydrogenase | SWIT_RS06910 | Not Available | - | 1511309 - 1512706 | 49949.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.