Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii RW1
Accession NumberNC_009511.1
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | SWIT_RS05645 | Not Available | - | 1244319 - 1245755 | 51519.5 |
| hypothetical protein | SWIT_RS05650 | Not Available | + | 1246056 - 1246427 | 13427.8 |
| srpbcc family protein | SWIT_RS05655 | Not Available | - | 1246708 - 1247157 | 16799.1 |
| rna polymerase sigma factor | SWIT_RS05660 | Not Available | - | 1247240 - 1248484 | 44918.1 |
| ycii family protein | SWIT_RS05665 | Not Available | - | 1248481 - 1248861 | 13369.0 |
| sphingomyelin phosphodiesterase | SWIT_RS05670 | Not Available | + | 1249068 - 1250123 | 36771.5 |
| alpha/beta hydrolase family protein | SWIT_RS05675 | Not Available | - | 1250133 - 1252103 | 71738.2 |
| prepilin peptidase | SWIT_RS05680 | Not Available | - | 1252181 - 1252927 | 25279.8 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | SWIT_RS05685 | Not Available | - | 1253104 - 1256202 | 109226.0 |
| lrp/asnc ligand binding domain-containing protein | SWIT_RS05690 | Not Available | + | 1256312 - 1256791 | 17956.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.