Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase family protein | HY78_RS04325 | Not Available | - | 893325 - 893654 | 12845.0 |
| dna ligase d | HY78_RS04330 | Not Available | - | 893705 - 896233 | 92153.0 |
| ku protein | HY78_RS04335 | Not Available | - | 896237 - 897094 | 31775.3 |
| methyl-accepting chemotaxis protein | HY78_RS04340 | Not Available | + | 897208 - 898614 | 50666.9 |
| cisplatin damage response atp-dependent dna ligase | HY78_RS04345 | Not Available | - | 898774 - 900372 | 58786.3 |
| ligase-associated dna damage response exonuclease | HY78_RS04350 | Not Available | - | 900426 - 901421 | 36103.2 |
| (2fe-2s)-binding protein | HY78_RS04355 | Not Available | + | 901565 - 902026 | 16102.3 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | HY78_RS04360 | Not Available | + | 902023 - 904203 | 76479.1 |
| hypothetical protein | HY78_RS04365 | Not Available | + | 904200 - 904817 | 21510.0 |
| 2og-fe(ii) oxygenase family protein | HY78_RS04370 | Not Available | - | 904872 - 905963 | 40305.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.