Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i mannose-6-phosphate isomerase | HY78_RS02825 | Not Available | - | 586258 - 587142 | 31454.4 |
| hypothetical protein | HY78_RS02830 | Not Available | - | 587325 - 587873 | 20333.3 |
| hypothetical protein | HY78_RS02835 | Not Available | - | 588124 - 588381 | 9313.49 |
| sensor histidine kinase | HY78_RS02840 | Not Available | + | 589235 - 590311 | 38945.9 |
| lytr/algr family response regulator transcription factor | HY78_RS02845 | Not Available | + | 590301 - 591038 | 27876.7 |
| 3-isopropylmalate dehydrogenase | HY78_RS02850 | Not Available | - | 591051 - 592091 | 36926.5 |
| dna repair protein reco | HY78_RS02855 | Not Available | - | 592163 - 592894 | 25782.0 |
| polysaccharide deacetylase family protein | HY78_RS02860 | Not Available | - | 592944 - 593909 | 34806.6 |
| excinuclease abc subunit uvrc | HY78_RS02865 | Not Available | - | 593909 - 595831 | 71164.5 |
| hypothetical protein | HY78_RS02870 | Not Available | - | 595903 - 596166 | 9017.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.