Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | HY78_RS02625 | Not Available | - | 535855 - 536925 | 37627.5 |
| hypothetical protein | HY78_RS02630 | Not Available | - | 537602 - 537925 | 12457.0 |
| hypothetical protein | HY78_RS02635 | Not Available | + | 537940 - 538716 | 27503.8 |
| metallophosphoesterase | HY78_RS02640 | Not Available | + | 538713 - 539507 | 28838.8 |
| glycosyltransferase | HY78_RS02645 | Not Available | + | 540027 - 542309 | 81807.6 |
| udp-glucose dehydrogenase family protein | HY78_RS02650 | Not Available | + | 542300 - 543655 | 48391.2 |
| glycoside hydrolase family 16 protein | HY78_RS02655 | Not Available | - | 543642 - 544442 | 29690.4 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | HY78_RS02660 | Not Available | + | 544913 - 546430 | 56650.4 |
| polysaccharide biosynthesis/export family protein | HY78_RS02665 | Not Available | + | 546471 - 547097 | 22066.9 |
| o-antigen ligase family protein | HY78_RS02670 | Not Available | + | 547105 - 548439 | 48066.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.