Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lasso peptide biosynthesis b2 protein | HY78_RS02575 | Not Available | - | 527000 - 527431 | 15835.6 |
| pqqd family protein | HY78_RS02580 | Not Available | - | 527415 - 527708 | 10523.7 |
| lasso ripp family leader peptide-containing protein | HY78_RS02585 | Not Available | - | 527799 - 527939 | 4795.45 |
| phosphoribosyltransferase family protein | HY78_RS02590 | Not Available | - | 528557 - 529564 | 37940.8 |
| sulfonate abc transporter permease | HY78_RS02595 | Not Available | - | 529744 - 530802 | 37089.4 |
| is1595 family transposase | HY78_RS02600 | Not Available | - | 530790 - 531812 | 37810.0 |
| glycosyltransferase family 2 protein | HY78_RS02605 | Not Available | + | 532130 - 533128 | 36995.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | HY78_RS02610 | Not Available | - | 533158 - 533706 | 20532.4 |
| nad(p)h-dependent oxidoreductase | HY78_RS02615 | Not Available | - | 533717 - 535042 | 46282.7 |
| glucose-1-phosphate cytidylyltransferase | HY78_RS02620 | Not Available | - | 535064 - 535837 | 28807.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.