Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | HY78_RS25790 | Not Available | + | 5474273 - 5475493 | 46051.2 |
| fad-dependent oxidoreductase | HY78_RS25795 | Not Available | - | 5475557 - 5476759 | 43044.5 |
| ybal family putative k(+) efflux transporter | HY78_RS25800 | Not Available | - | 5476776 - 5478401 | 56839.1 |
| cation:proton antiporter | HY78_RS25805 | Not Available | + | 5478526 - 5480310 | 63025.0 |
| mfs transporter | HY78_RS25810 | Not Available | + | 5480368 - 5482053 | 60370.8 |
| hlyd family secretion protein | HY78_RS25815 | Not Available | + | 5482055 - 5483182 | 39531.9 |
| efflux transporter outer membrane subunit | HY78_RS25820 | Not Available | + | 5483182 - 5484561 | 48624.8 |
| dna polymerase i | HY78_RS25825 | Not Available | + | 5484628 - 5487414 | 100710.0 |
| lipopolysaccharide biosynthesis protein | HY78_RS25830 | Not Available | + | 5487411 - 5488919 | 53720.9 |
| mfs transporter | HY78_RS25835 | Not Available | - | 5488923 - 5490590 | 59335.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.