Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| parb/repb/spo0j family partition protein | HY78_RS25190 | Not Available | + | 5340051 - 5342039 | 71394.2 |
| sulfonate abc transporter permease | HY78_RS25195 | Not Available | + | 5342207 - 5342833 | 23540.1 |
| sulfonate abc transporter permease | HY78_RS25200 | Not Available | - | 5342916 - 5343908 | 36762.6 |
| tyrosine-type recombinase/integrase | HY78_RS25205 | Not Available | - | 5343905 - 5344846 | 35213.6 |
| tyrosine-type recombinase/integrase | HY78_RS25210 | Not Available | - | 5344843 - 5346054 | 44731.4 |
| zincin-like metallopeptidase domain-containing protein | HY78_RS25215 | Not Available | + | 5346037 - 5346327 | 10654.5 |
| tyrosine-type recombinase/integrase | HY78_RS25220 | Not Available | + | 5346482 - 5347873 | 51641.7 |
| sulfonate abc transporter permease | HY78_RS25225 | Not Available | + | 5347870 - 5349414 | 56725.8 |
| is1380 family transposase | HY78_RS25230 | Not Available | - | 5349582 - 5350952 | 50239.4 |
| integrase | HY78_RS25235 | Not Available | + | 5351303 - 5353528 | 81114.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.