Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | HY78_RS25040 | Not Available | - | 5307519 - 5308175 | 23503.1 |
| toprim domain-containing protein | HY78_RS25045 | Not Available | + | 5308300 - 5309199 | 32132.4 |
| is1380 family transposase | HY78_RS25050 | Not Available | + | 5309280 - 5310650 | 50239.4 |
| is1380 family transposase | HY78_RS25055 | Not Available | + | 5310950 - 5312299 | 49607.8 |
| strawberry notch-like ntp hydrolase domain-containing protein | HY78_RS25060 | Not Available | + | 5312570 - 5316811 | 153363.0 |
| mbca/pars/xre antitoxin family protein | HY78_RS25065 | Not Available | + | 5316865 - 5317278 | 15345.5 |
| res family nad+ phosphorylase | HY78_RS25070 | Not Available | + | 5317275 - 5318009 | 26778.5 |
| duf6933 domain-containing protein | HY78_RS25075 | Not Available | - | 5318075 - 5318587 | 18823.9 |
| sulfonate abc transporter permease | HY78_RS25080 | Not Available | - | 5318917 - 5319950 | 37485.3 |
| hypothetical protein | HY78_RS25085 | Not Available | + | 5320395 - 5321660 | 47297.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.