Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class iv | HY78_RS06525 | Not Available | + | 1356774 - 1357397 | 22523.0 |
| pyridoxal phosphate-dependent aminotransferase | HY78_RS06530 | Not Available | + | 1357514 - 1358716 | 42921.2 |
| peptide-methionine (s)-s-oxide reductase msra | HY78_RS06535 | Not Available | + | 1358924 - 1359661 | 26179.3 |
| ggdef domain-containing protein | HY78_RS06540 | Not Available | - | 1359646 - 1359900 | 8770.63 |
| is21-like element helper atpase istb | HY78_RS06545 | Not Available | - | 1360070 - 1360798 | 26672.3 |
| is21 family transposase | HY78_RS06550 | Not Available | - | 1360785 - 1362299 | 57437.9 |
| sulfonate abc transporter permease | HY78_RS06555 | Not Available | - | 1362402 - 1363367 | 35775.0 |
| ligase-associated dna damage response endonuclease pdem | HY78_RS06560 | Not Available | - | 1363462 - 1364124 | 23770.8 |
| sulfite exporter taue/safe family protein | HY78_RS06565 | Not Available | + | 1364257 - 1365171 | 31727.4 |
| tigr02186 family protein | HY78_RS06570 | Not Available | + | 1365168 - 1365926 | 27410.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.