Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | HY78_RS05825 | Not Available | - | 1216122 - 1218152 | 74709.7 |
| relaxase/mobilization nuclease domain-containing protein | HY78_RS05830 | Not Available | - | 1218332 - 1220062 | 63929.3 |
| lytic transglycosylase domain-containing protein | HY78_RS05835 | Not Available | - | 1220322 - 1221224 | 31469.5 |
| duf736 domain-containing protein | HY78_RS05840 | Not Available | - | 1221228 - 1221560 | 12349.3 |
| s26 family signal peptidase | HY78_RS05845 | Not Available | - | 1221541 - 1222119 | 20415.8 |
| duf2840 domain-containing protein | HY78_RS05850 | Not Available | - | 1222116 - 1222637 | 19428.4 |
| sulfonate abc transporter permease | HY78_RS05855 | Not Available | - | 1222721 - 1222912 | 6755.97 |
| replication initiator protein a | HY78_RS05860 | Not Available | - | 1222909 - 1223802 | 33629.5 |
| helix-turn-helix transcriptional regulator | HY78_RS05865 | Not Available | - | 1223809 - 1224075 | 9599.54 |
| duf2285 domain-containing protein | HY78_RS05870 | Not Available | - | 1224196 - 1224972 | 28403.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.