Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HY78_RS05375 | Not Available | + | 1122836 - 1123216 | 12878.5 |
| cystathionine beta-lyase | HY78_RS05380 | Not Available | - | 1123268 - 1124464 | 42283.5 |
| 3-mercaptopyruvate sulfurtransferase | HY78_RS05385 | Not Available | - | 1124461 - 1125327 | 31156.8 |
| preq(1) synthase | HY78_RS05390 | Not Available | + | 1125491 - 1125943 | 16396.6 |
| s10 family peptidase | HY78_RS05395 | Not Available | - | 1126100 - 1127611 | 54708.3 |
| isopenicillin n synthase family dioxygenase | HY78_RS05400 | Not Available | - | 1127724 - 1128770 | 38350.8 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | HY78_RS05405 | Not Available | - | 1128784 - 1129941 | 41737.3 |
| amp-binding protein | HY78_RS05410 | Not Available | + | 1130118 - 1131611 | 54307.7 |
| nad-dependent epimerase/dehydratase family protein | HY78_RS05415 | Not Available | + | 1131648 - 1132550 | 32097.4 |
| nuclear transport factor 2 family protein | HY78_RS05420 | Not Available | + | 1132547 - 1133002 | 17042.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.