Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c maturation protein ccme | HY78_RS04275 | Not Available | - | 887696 - 888163 | 16599.0 |
| heme exporter protein ccmd | HY78_RS04280 | Not Available | - | 888163 - 888294 | 4888.04 |
| heme abc transporter permease ccmc | HY78_RS04285 | Not Available | - | 888291 - 889007 | 25907.2 |
| dmt family transporter | HY78_RS04290 | Not Available | + | 889101 - 890030 | 32529.6 |
| glu/leu/phe/val family dehydrogenase | HY78_RS04295 | Not Available | - | 890060 - 891109 | 35838.9 |
| type ii toxin-antitoxin system rele/pare family toxin | HY78_RS04300 | Not Available | + | 891354 - 891683 | 11362.8 |
| helix-turn-helix domain-containing protein | HY78_RS04305 | Not Available | + | 891692 - 891985 | 10463.5 |
| Trna-his | Not Available | Not Available | + | 892090 - 892166 | Not Available |
| rrf2 family transcriptional regulator | HY78_RS04315 | Not Available | + | 892307 - 892720 | 15250.6 |
| hypothetical protein | HY78_RS04320 | Not Available | + | 892938 - 893171 | 7620.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.