Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is1380 family transposase | HY78_RS04175 | Not Available | - | 864750 - 866120 | 50239.4 |
| calcium-binding protein | HY78_RS04180 | Not Available | + | 866377 - 867648 | 41862.7 |
| glycosyltransferase | HY78_RS04185 | Not Available | - | 867965 - 869191 | 45118.6 |
| class i sam-dependent methyltransferase | HY78_RS04190 | Not Available | - | 869202 - 869813 | 22059.6 |
| m23 family metallopeptidase | HY78_RS04195 | Not Available | - | 869861 - 870850 | 34157.1 |
| glycosyltransferase | HY78_RS04200 | Not Available | - | 870860 - 874765 | 140998.0 |
| sulfotransferase family protein | HY78_RS04205 | Not Available | - | 874762 - 875961 | 42866.0 |
| duf1796 family putative cysteine peptidase | HY78_RS04210 | Not Available | + | 876080 - 876745 | 25316.2 |
| methyltransferase domain-containing protein | HY78_RS04215 | Not Available | + | 876804 - 877772 | 34916.2 |
| gscfa domain-containing protein | HY78_RS04220 | Not Available | - | 877776 - 878855 | 38853.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.