Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HY78_RS04125 | Not Available | + | 846848 - 847741 | 33739.1 |
| class i sam-dependent methyltransferase | HY78_RS04130 | Not Available | + | 847743 - 848780 | 39223.2 |
| class i sam-dependent methyltransferase | HY78_RS04135 | Not Available | - | 848814 - 849767 | 35250.1 |
| class i sam-dependent methyltransferase | HY78_RS04140 | Not Available | - | 849925 - 852585 | 95738.8 |
| glycosyltransferase | HY78_RS04145 | Not Available | - | 852639 - 856799 | 151018.0 |
| tolc family outer membrane protein | HY78_RS04150 | Not Available | + | 857001 - 858689 | 61567.9 |
| type i secretion system permease/atpase | HY78_RS04155 | Not Available | + | 858778 - 860499 | 61664.4 |
| hlyd family type i secretion periplasmic adaptor subunit | HY78_RS04160 | Not Available | + | 860523 - 861911 | 49960.8 |
| sulfotransferase domain-containing protein | HY78_RS04165 | Not Available | + | 861908 - 862672 | 29093.4 |
| is1380 family transposase | HY78_RS04170 | Not Available | - | 863101 - 864450 | 49607.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.