Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease subunit hslv | HY78_RS03425 | Not Available | - | 696528 - 697079 | 19380.4 |
| dmt family protein | HY78_RS03430 | Not Available | - | 697195 - 697548 | 12996.5 |
| cistern family pep-cterm protein | HY78_RS03435 | Not Available | - | 697577 - 698287 | 24626.8 |
| sulfonate abc transporter permease | HY78_RS03440 | Not Available | - | 698416 - 698619 | 7549.1 |
| sulfonate abc transporter permease | HY78_RS03445 | Not Available | - | 698654 - 699831 | 42287.8 |
| is1380 family transposase | HY78_RS03450 | Not Available | - | 700138 - 701487 | 49607.8 |
| tetr/acrr family transcriptional regulator | HY78_RS03455 | Not Available | - | 701788 - 702456 | 25013.1 |
| llm class flavin-dependent oxidoreductase | HY78_RS03460 | Not Available | + | 702774 - 703913 | 42647.8 |
| tetr/acrr family transcriptional regulator | HY78_RS03465 | Not Available | - | 704015 - 704608 | 21580.1 |
| smp-30/gluconolactonase/lre family protein | HY78_RS03470 | Not Available | - | 704662 - 705597 | 34313.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.