Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | HY78_RS02725 | Not Available | - | 562372 - 563148 | 28074.7 |
| gmc family oxidoreductase | HY78_RS02730 | Not Available | + | 563251 - 564903 | 59696.4 |
| sensor histidine kinase | HY78_RS02735 | Not Available | - | 564910 - 566256 | 48859.9 |
| response regulator transcription factor | HY78_RS02740 | Not Available | - | 566253 - 566930 | 24849.0 |
| pepsy domain-containing protein | HY78_RS02745 | Not Available | - | 566961 - 567461 | 17988.7 |
| cdp-glycerol glycerophosphotransferase family protein | HY78_RS02750 | Not Available | - | 567487 - 568731 | 45338.2 |
| efflux transporter outer membrane subunit | HY78_RS02755 | Not Available | - | 568824 - 570266 | 50219.0 |
| dha2 family efflux mfs transporter permease subunit | HY78_RS02760 | Not Available | - | 570275 - 571846 | 55192.9 |
| hlyd family secretion protein | HY78_RS02765 | Not Available | - | 571843 - 573000 | 40854.5 |
| marr family winged helix-turn-helix transcriptional regulator | HY78_RS02770 | Not Available | + | 573084 - 573536 | 16614.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.