Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | HY78_RS26040 | Not Available | + | 5528915 - 5529910 | 34672.0 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | HY78_RS26045 | Not Available | + | 5529907 - 5530737 | 29385.8 |
| hypothetical protein | HY78_RS26050 | Not Available | - | 5530871 - 5531404 | 18088.8 |
| rsmb/nop family class i sam-dependent rna methyltransferase | HY78_RS26055 | Not Available | - | 5531440 - 5532609 | 40917.7 |
| imp dehydrogenase | HY78_RS26060 | Not Available | - | 5532616 - 5534073 | 51376.8 |
| sensor domain-containing diguanylate cyclase | HY78_RS26065 | Not Available | - | 5534181 - 5535317 | 40019.2 |
| phosphoenolpyruvate carboxykinase | HY78_RS26070 | Not Available | - | 5535459 - 5537057 | 57730.6 |
| response regulator transcription factor | HY78_RS26075 | Not Available | + | 5537314 - 5538021 | 26802.1 |
| sensor histidine kinase | HY78_RS26080 | Not Available | + | 5538008 - 5539597 | 58068.5 |
| hpr kinase/phosphorylase | HY78_RS26085 | Not Available | + | 5539601 - 5540050 | 15404.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.