Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system secretin trak | HY78_RS25490 | Not Available | - | 5409097 - 5409852 | 26864.7 |
| type iv conjugative transfer system protein trae | HY78_RS25495 | Not Available | - | 5409852 - 5410424 | 20941.2 |
| type iv conjugative transfer system protein tral | HY78_RS25500 | Not Available | - | 5410436 - 5410723 | 10531.9 |
| hypothetical protein | HY78_RS25505 | Not Available | - | 5410750 - 5411079 | 10622.2 |
| hypothetical protein | HY78_RS25510 | Not Available | + | 5411430 - 5411891 | 16956.6 |
| alpa family phage regulatory protein | HY78_RS25515 | Not Available | + | 5411961 - 5412176 | 8062.9 |
| hepn domain-containing protein | HY78_RS25520 | Not Available | + | 5412225 - 5412917 | 26732.7 |
| helicase-related protein | HY78_RS25525 | Not Available | - | 5412899 - 5416024 | 116554.0 |
| phospholipase d family protein | HY78_RS25530 | Not Available | - | 5416021 - 5417883 | 67410.9 |
| duf6361 family protein | HY78_RS25535 | Not Available | - | 5417873 - 5419039 | 43637.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.