Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6
Accession NumberNZ_CP021181.1
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system pilin assembly protein trbc | HY78_RS25440 | Not Available | - | 5399729 - 5400493 | 26169.0 |
| conjugal transfer pilus assembly protein trau | HY78_RS25445 | Not Available | - | 5400490 - 5401518 | 37119.3 |
| type-f conjugative transfer system protein traw | HY78_RS25450 | Not Available | - | 5401515 - 5402162 | 23770.0 |
| s26 family signal peptidase | HY78_RS25455 | Not Available | - | 5402159 - 5402683 | 18547.8 |
| type-f conjugative transfer system protein trbi | HY78_RS25460 | Not Available | - | 5402670 - 5403077 | 14451.8 |
| hypothetical protein | HY78_RS25465 | Not Available | - | 5403074 - 5403466 | 14521.9 |
| type iv secretion system protein trac | HY78_RS25470 | Not Available | - | 5403496 - 5406039 | 92984.1 |
| conjugal transfer protein trav | HY78_RS25475 | Not Available | - | 5406039 - 5406848 | 27713.1 |
| dsbc family protein | HY78_RS25480 | Not Available | - | 5406853 - 5407767 | 31940.4 |
| trbi/virb10 family protein | HY78_RS25485 | Not Available | - | 5407764 - 5409104 | 45835.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.